MolNFT v1 · #68042 · protein + RNA
Structure of a non-translocating secy protein channel with the 70S ribosome
3J45: “Structure of a non-translocating secy protein channel with the 70S ribosome”. Electron microscopy. MolNFT v1 #68042 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3J45
- Type
- protein + RNA
- Length
- 1,106 residues
- Chains
- 11
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0AGA2, P0AG96, P0AG99, P0ADZ0, P60624, P0A7M6
Structure
electron microscopy · 11 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| y | — | protein | 435 | — | P0AGA2 |
| E | — | protein | 54 | — | P0AG96 |
| G | — | protein | 65 | — | P0AG99 |
| T | — | protein | 100 | — | P0ADZ0 |
| U | — | protein | 103 | — | P60624 |
| Y | — | protein | 63 | — | P0A7M6 |
| 1 | — | rna | 63 | — | — |
| 2 | — | rna | 36 | — | — |
| 3 | — | rna | 18 | — | — |
| 4 | — | rna | 61 | — | — |
| 5 | — | rna | 108 | — | — |
Compared structures
- 3J45 · Structure of a non-translocating SecY protein channel with the 70S ribosome · the same entry in another collection · chain 5 against 5, TM-score 1.00
- P0AGA2 · AlphaFold monomer V2.0 prediction for protein translocase subunit secy (P0AGA2) · a predicted model of the same protein · chain y against A, TM-score 0.80
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0AGA2
- Every structure of UniProt P0AG96
- Every structure of UniProt P0AG99
- Every structure of UniProt P0ADZ0
- Every structure of UniProt P60624
- Every structure of UniProt P0A7M6
- Elsewhere: RCSB PDB 3J45 · PDBe 3J45 · UniProt P0AGA2 · UniProt P0AG96 · UniProt P0AG99 · UniProt P0ADZ0 · UniProt P60624 · UniProt P0A7M6
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