MolNFT v1 · #67614 · protein
The crystal structure of one domain of the pts system, iiabc component from clostridium difficile
3IPJ: “The crystal structure of one domain of the pts system, iiabc component from clostridium difficile”. X-ray diffraction, 1 ligand (ZN). MolNFT v1 #67614 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3IPJ
- Type
- protein
- Length
- 190 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Pts system, iiabc component
- UniProt
- Q188R0
- Ligands
- ZN
Structure
x-ray diffraction · 1 distinct chain · 35% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Pts system, iiabc component | protein | 95 | 35% helix, 24% strand | Q188R0 |
Ligands and binding sites
- ZN · Zinc ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 349 Ų buried · 15 hydrogen bonds · protein-protein
Compared structures
- 3IPJ · The crystal structure of one domain of the PTS system, IIabc component from Clostridium… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q188R0
- Elsewhere: RCSB PDB 3IPJ · PDBe 3IPJ · UniProt Q188R0
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