Research workbench
The crystal structure of one domain of the pts system, iiabc component from clostridium difficile
Analyse The crystal structure of one domain of the pts system, iiabc component from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3IPJ
- Type
- protein
- Length
- 190 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Pts system, iiabc component
- UniProt
- Q188R0
- Ligands
- ZN
Structure
x-ray diffraction · 1 distinct chain · 35% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Pts system, iiabc component | protein | 95 | 35% helix, 24% strand | Q188R0 |
Ligands and binding sites
- ZN · Zinc ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 349 Ų buried · 15 hydrogen bonds · protein-protein
Compared structures
- 3IPJ · The crystal structure of one domain of the PTS system, IIabc component from Clostridium… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q188R0
- Elsewhere: RCSB PDB 3IPJ · PDBe 3IPJ · UniProt Q188R0
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