MolNFT v1 · #67301 · protein

Crystal structure of the ALL4481 protein from nostoc sp. pcc 7120, northeast structural genomics consortium target NSR300

3IGF: “Crystal structure of the ALL4481 protein from nostoc sp. pcc 7120, northeast structural genomics consortium…”. X-ray diffraction, 8 pockets (best druggability 0.86). MolNFT v1 #67301 on GenesisL1: 3D structure, binding sites and…

PDB: 3IGF
Type: protein
Length: 669 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: ALL4481 protein
UniProt: Q8YNT0
Pockets: 8 · best druggability 0.86

Structure

x-ray diffraction · 2 distinct chains · 39% helix, 23% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	ALL4481 protein	protein	333	39% helix, 25% strand	Q8YNT0
B	ALL4481 protein	protein	336	39% helix, 22% strand	Q8YNT0

Pockets

8 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	378	0.86	0.95	71	empty
2	519	0.70	0.80	47	empty
3	285	0.64	0.81	30	empty
4	240	0.62	0.81	27	empty
5	217	0.61	0.81	36	empty

Interfaces

1 interface between chains.

A–B · 3109 Å² buried · 36 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 4 modified (engineered).

Compared structures

3IGF · Crystal Structure of the All4481 protein from Nostoc sp. PCC 7120, Northeast Structural… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8YNT0
Elsewhere: RCSB PDB 3IGF · PDBe 3IGF · UniProt Q8YNT0

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