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Crystal structure of the ALL4481 protein from nostoc sp. pcc 7120, northeast structural genomics consortium target NSR300

Analyse Crystal structure of the ALL4481 protein from nostoc sp. pcc 7120, northeast… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3IGF
Type: protein
Length: 669 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: ALL4481 protein
UniProt: Q8YNT0
Pockets: 8 · best druggability 0.86

Structure

x-ray diffraction · 2 distinct chains · 39% helix, 23% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	ALL4481 protein	protein	333	39% helix, 25% strand	Q8YNT0
B	ALL4481 protein	protein	336	39% helix, 22% strand	Q8YNT0

Pockets

8 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	378	0.86	0.95	71	empty
2	519	0.70	0.80	47	empty
3	285	0.64	0.81	30	empty
4	240	0.62	0.81	27	empty
5	217	0.61	0.81	36	empty

Interfaces

1 interface between chains.

A–B · 3109 Å² buried · 36 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 4 modified (engineered).

Compared structures

3IGF · Crystal Structure of the All4481 protein from Nostoc sp. PCC 7120, Northeast Structural… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8YNT0
Elsewhere: RCSB PDB 3IGF · PDBe 3IGF · UniProt Q8YNT0

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