MolNFT v1 · #67143 · protein
The crystal structure of the dimerization domain of escherichia COLI structural maintenance of chromosomes protein mukb
3IBP · Chromosome partition protein mukb: “The crystal structure of the dimerization domain of escherichia COLI structural maintenance of chromosomes…”. X-ray diffraction, 1 ligand (NH4), 2 pockets (best druggability 0.36). MolNFT v1…
- PDB
- 3IBP
- Type
- protein
- Length
- 283 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Chromosome partition protein mukb
- UniProt
- P22523
- Ligands
- NH4
- Pockets
- 2 · best druggability 0.36
Structure
x-ray diffraction · 1 distinct chain · 64% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Chromosome partition protein mukb | protein | 283 | 64% helix, 9% strand | P22523 |
Ligands and binding sites
- NH4 · Ammonium ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 77 | 0.36 | 0.76 | 16 | empty |
| 2 | 56 | 0.27 | 0.74 | 17 | empty |
Modifications
Observed in the structure: 2 modified (engineered).
Compared structures
- 3IBP · The Crystal Structure of the Dimerization Domain of Escherichia coli Structural… · the same entry in another collection · chain A against A, TM-score 1.00
- P22523 · AlphaFold monomer V2.0 prediction for chromosome partition protein mukb (P22523) · a predicted model of the same protein · chain A against A, TM-score 0.63
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P22523
- Elsewhere: RCSB PDB 3IBP · PDBe 3IBP · UniProt P22523
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