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The crystal structure of the dimerization domain of escherichia COLI structural maintenance of chromosomes protein mukb
Analyse The crystal structure of the dimerization domain of escherichia COLI structural… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3IBP
- Type
- protein
- Length
- 283 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Chromosome partition protein mukb
- UniProt
- P22523
- Ligands
- NH4
- Pockets
- 2 · best druggability 0.36
Structure
x-ray diffraction · 1 distinct chain · 64% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Chromosome partition protein mukb | protein | 283 | 64% helix, 9% strand | P22523 |
Ligands and binding sites
- NH4 · Ammonium ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 77 | 0.36 | 0.76 | 16 | empty |
| 2 | 56 | 0.27 | 0.74 | 17 | empty |
Modifications
Observed in the structure: 2 modified (engineered).
Compared structures
- 3IBP · The Crystal Structure of the Dimerization Domain of Escherichia coli Structural… · the same entry in another collection · chain A against A, TM-score 1.00
- P22523 · AlphaFold monomer V2.0 prediction for chromosome partition protein mukb (P22523) · a predicted model of the same protein · chain A against A, TM-score 0.63
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P22523
- Elsewhere: RCSB PDB 3IBP · PDBe 3IBP · UniProt P22523
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