MolNFT v1 · #65625 · protein

Crystal structure of a rice cell wall degrading esterase lipa from xanthomonas oryzae

3H2G: “Crystal structure of a rice cell wall degrading esterase lipa from xanthomonas oryzae”. X-ray diffraction, 1 pocket (best druggability 0.76). MolNFT v1 #65625 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3H2G
Type: protein
Length: 387 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Esterase
EC: 3.1.1.-
UniProt: Q5H5J0
Pockets: 1 · best druggability 0.76

Structure

x-ray diffraction · 1 distinct chain · 42% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Esterase (EC 3.1.1.-)	protein	387	42% helix, 21% strand	Q5H5J0

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	471	0.76	0.84	53	empty

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

3H2G · Crystal structure of a rice cell wall degrading esterase LipA from Xanthomonas oryzae · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q5H5J0
Elsewhere: RCSB PDB 3H2G · PDBe 3H2G · UniProt Q5H5J0

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