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Crystal structure of a rice cell wall degrading esterase lipa from xanthomonas oryzae
Analyse Crystal structure of a rice cell wall degrading esterase lipa from xanthomonas… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3H2G
- Type
- protein
- Length
- 387 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Esterase
- EC
- 3.1.1.-
- UniProt
- Q5H5J0
- Pockets
- 1 · best druggability 0.76
Structure
x-ray diffraction · 1 distinct chain · 42% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Esterase (EC 3.1.1.-) | protein | 387 | 42% helix, 21% strand | Q5H5J0 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 471 | 0.76 | 0.84 | 53 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 3H2G · Crystal structure of a rice cell wall degrading esterase LipA from Xanthomonas oryzae · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5H5J0
- Elsewhere: RCSB PDB 3H2G · PDBe 3H2G · UniProt Q5H5J0
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