MolNFT v1 · #64119 · protein
Crystal structure of the major pseudopilin from the type 2 secretion system of vibrio cholerae
3FU1 · General secretion pathway protein G: “Crystal structure of the major pseudopilin from the type 2 secretion system of vibrio cholerae”. X-ray diffraction, 2 ligands (ZN, CA), 1 pocket (best druggability 0.39). MolNFT v1 #64119 on…
- PDB
- 3FU1
- Type
- protein
- Length
- 227 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- General secretion pathway protein G
- UniProt
- P45773
- Ligands
- ZN, CA
- Pockets
- 1 · best druggability 0.39
Structure
x-ray diffraction · 2 distinct chains · 37% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | General secretion pathway protein G | protein | 115 | 37% helix, 10% strand | P45773 |
| B | General secretion pathway protein G | protein | 112 | 37% helix, 10% strand | P45773 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 149 | 0.39 | 0.73 | 26 | empty |
Interfaces
1 interface between chains.
- A–B · 882 Ų buried · 19 hydrogen bonds · protein-protein
Compared structures
- 3FU1 · Crystal structure of the major pseudopilin from the type 2 secretion system of Vibrio… · the same entry in another collection · chain A against A, TM-score 1.00
- P45773 · AlphaFold monomer V2.0 prediction for type II secretion system core protein G (P45773) · a predicted model of the same protein · chain B against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P45773
- Elsewhere: RCSB PDB 3FU1 · PDBe 3FU1 · UniProt P45773
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.