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MolNFT v1 · #63950 · protein

Anionic trypsin in complex with bovine pancreatic trypsin inhibitor (bpti) determined to the 1.49 a resolution limit

3FP6 · Anionic trypsin-2: “Anionic trypsin in complex with bovine pancreatic trypsin inhibitor (bpti) determined to the 1.49 a…”. X-ray diffraction, 2 ligands (CA, SO4), 2 pockets (best druggability 0.32). MolNFT v1 #63950 on GenesisL1: 3D…

PDB
3FP6
Type
protein
Length
281 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Anionic trypsin-2; Pancreatic trypsin inhibitor
EC
3.4.21.4
UniProt
P00763, P00974
Ligands
CA, SO4
Pockets
2 · best druggability 0.32

Structure

x-ray diffraction · 2 distinct chains · 12% helix, 34% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
EAnionic trypsin-2 (EC 3.4.21.4)protein22310% helix, 36% strandP00763
IPancreatic trypsin inhibitorprotein5821% helix, 28% strandP00974

Ligands and binding sites

  • CA · Calcium ion · metal · chains E
  • SO4 · Sulfate ion · ion · 4 copies · chains E, I
  • EDO · 1,2-ethanediol · additive · 8 copies · chains E, I
  • PG4 · Tetraethylene glycol · additive · chains E

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
1660.320.7514EDO
2710.280.7215SO4

Interfaces

1 interface between chains.

  • E–I · 664 Ų buried · 15 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 9 disulfide (disulfide).

Compared structures

  • 3FP6 · Anionic trypsin in complex with bovine pancreatic trypsin inhibitor (BPTI) determined to… · the same entry in another collection · chain E against E, TM-score 1.00
  • P00763 · AlphaFold monomer V2.0 prediction for anionic trypsin-2 (P00763) · a predicted model of the same protein · chain E against A, TM-score 1.00
  • P00974 · AlphaFold monomer V2.0 prediction for pancreatic trypsin inhibitor (P00974) · a predicted model of the same protein · chain I against A, TM-score 0.98

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