MolNFT v1 · #63711 · protein
Crystal structure of the protein prib from bordetella parapertussis. northeast structural genomics consortium target BPR162.
3FHW · Primosomal replication protein N: “Crystal structure of the protein prib from bordetella parapertussis. northeast structural genomics consortium…”. X-ray diffraction, 1 ligand (NA), 1 pocket (best druggability 0.34). MolNFT v1…
- PDB
- 3FHW
- Type
- protein
- Length
- 200 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Primosomal replication protein N
- UniProt
- P67675
- Ligands
- NA
- Pockets
- 1 · best druggability 0.34
Structure
x-ray diffraction · 1 distinct chain · 6% helix, 57% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Primosomal replication protein N | protein | 100 | 6% helix, 57% strand | P67675 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 84 | 0.34 | 0.74 | 15 | empty |
Interfaces
1 interface between chains.
- A–B · 1359 Ų buried · 15 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 8 modified (engineered).
Compared structures
- 3FHW · Crystal structure of the protein priB from Bordetella parapertussis. Northeast Structural… · the same entry in another collection · chain A against A, TM-score 1.00
- P67675 · AlphaFold monomer V2.0 prediction for primosomal replication protein N (P67675) · a predicted model of the same protein · chain A against A, TM-score 0.93
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P67675
- Elsewhere: RCSB PDB 3FHW · PDBe 3FHW · UniProt P67675
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