GL1X · GenesisL1 explorer

MolNFT v1 · #63588 · protein

Crystal structure of hdmx bound to the P53-peptidomimetic ac-phe-met- aib-pmp-TRP-glu-AC3C-leu-NH2 at 1.35A

3FE7 · MDM4 protein: “Crystal structure of hdmx bound to the P53-peptidomimetic ac-phe-met- aib-pmp-TRP-glu-AC3C-leu-NH2 at 1.35A”. X-ray diffraction, 2 ligands (ACE, NH2). MolNFT v1 #63588 on GenesisL1: 3D structure, binding sites and…

PDB
3FE7
Type
protein
Length
91 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
MDM4 protein; P53-peptidomimetic ac-phe-met-aib-pmp-TRP-glu-AC3C-leu-NH2
UniProt
O15151
Ligands
ACE, NH2

Structure

x-ray diffraction · 2 distinct chains · 47% helix, 19% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AMDM4 proteinprotein8347% helix, 20% strandO15151
LP53-peptidomimetic ac-phe-met-aib-pmp-TRP-glu-AC3C-leu-NH2protein850% helix, 0% strand—

Ligands and binding sites

  • ACE · Acetyl group · ligand · chains A, L
  • NH2 · Amino group · ion · chains A, L

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

  • A–L · 478 Ų buried · 3 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 3 modified, 1 covalent (nonstandard, covalent ligand).

Compared structures

  • 3FE7 · Crystal Structure of HdmX bound to the p53-peptidomimetic… · the same entry in another collection · chain A against A, TM-score 1.00
  • O15151 · AlphaFold monomer V2.0 prediction for protein MDM4 (O15151) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.