MolNFT v1 · #6264 · RNA

Solution structure of RNase P RNA (M1 RNA) P4 stem C70U mutant oligoribonucleotide complexed with COBALT(III) hexammine, NMR, minimized average structure

1F79 · RNase P RNA ribozyme, P4 domain mutant: “Solution structure of RNase P RNA (M1 RNA) P4 stem C70U mutant oligoribonucleotide complexed with COBALT(III)…”. Solution nmr, 1 ligand (NCO), 1 pocket (best druggability 0.55). MolNFT v1…

PDB: 1F79
Type: RNA
Length: 27 nucleotides
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: RNase P RNA ribozyme, P4 domain mutant
Ligands: NCO
Pockets: 1 · best druggability 0.55

Structure

solution nmr · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	RNase P RNA ribozyme, P4 domain mutant	rna	27	—	—

Ligands and binding sites

NCO · Cobalt hexammine(iii) · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	290	0.55	0.77	18	NCO

Compared structures

1F79 · Solution structure of RNase P RNA (M1 RNA) P4 stem C70U mutant oligoribonucleotide… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 1F79 · PDBe 1F79

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.