MolNFT v1 · #62430 · protein
Crystal structure of putative N-acetyltransferase from lactobacillus plantarum
3EFA · Putative acetyltransferase: “Crystal structure of putative N-acetyltransferase from lactobacillus plantarum”. X-ray diffraction, 1 ligand (PO4), 1 pocket (best druggability 0.67). MolNFT v1 #62430 on GenesisL1: 3D structure, binding…
- PDB
- 3EFA
- Type
- protein
- Length
- 146 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative acetyltransferase
- UniProt
- Q88W61
- Ligands
- PO4
- Pockets
- 1 · best druggability 0.67
Structure
x-ray diffraction · 1 distinct chain · 34% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative acetyltransferase | protein | 146 | 34% helix, 35% strand | Q88W61 |
Ligands and binding sites
- PO4 · Phosphate ion · ion · chains A
- FMT · Formic acid · additive · 4 copies · chains A
- GOL · Glycerol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 515 | 0.67 | 0.78 | 42 | FMT, GOL |
Modifications
Observed in the structure: 3 modified (engineered).
Compared structures
- 3EFA · Crystal structure of putative N-acetyltransferase from Lactobacillus plantarum · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q88W61
- Elsewhere: RCSB PDB 3EFA · PDBe 3EFA · UniProt Q88W61
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