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Crystal structure of putative N-acetyltransferase from lactobacillus plantarum

Analyse Crystal structure of putative N-acetyltransferase from lactobacillus plantarum in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3EFA
Type: protein
Length: 146 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative acetyltransferase
UniProt: Q88W61
Ligands: PO4
Pockets: 1 · best druggability 0.67

Structure

x-ray diffraction · 1 distinct chain · 34% helix, 35% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative acetyltransferase	protein	146	34% helix, 35% strand	Q88W61

Ligands and binding sites

PO4 · Phosphate ion · ion · chains A
FMT · Formic acid · additive · 4 copies · chains A
GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	515	0.67	0.78	42	FMT, GOL

Modifications

Observed in the structure: 3 modified (engineered).

Compared structures

3EFA · Crystal structure of putative N-acetyltransferase from Lactobacillus plantarum · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q88W61
Elsewhere: RCSB PDB 3EFA · PDBe 3EFA · UniProt Q88W61

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