MolNFT v1 · #61988 · protein

Crystal structure of M. tuberculosis glucosyl-3- phosphoglycerate synthase

3E25 · Putative uncharacterized protein: “Crystal structure of M. tuberculosis glucosyl-3- phosphoglycerate synthase”. X-ray diffraction, 3 ligands (UDP, 3PG, MG), 1 pocket (best druggability 0.72). MolNFT v1 #61988 on GenesisL1: 3D…

PDB: 3E25
Type: protein
Length: 270 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative uncharacterized protein
EC: 2.4.1.-
UniProt: O05309
Ligands: UDP, 3PG, MG
Pockets: 1 · best druggability 0.72

Structure

x-ray diffraction · 1 distinct chain · 40% helix, 17% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative uncharacterized protein (EC 2.4.1.-)	protein	270	40% helix, 17% strand	O05309

Ligands and binding sites

UDP · Uridine-5'-diphosphate · ligand · chains A
3PG · 3-phosphoglyceric acid · ligand · chains A
MG · Magnesium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	590	0.72	0.80	51	MG, UDP, 3PG

Compared structures

3E25 · Crystal structure of M. tuberculosis glucosyl-3-phosphoglycerate synthase · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O05309
Elsewhere: RCSB PDB 3E25 · PDBe 3E25 · UniProt O05309

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