MolNFT v1 · #61974 · protein
Midbody targeting of the escrt machinery by a non-canonical coiled-coil in CEP55
3E1R · Centrosomal protein of 55 kda: “Midbody targeting of the escrt machinery by a non-canonical coiled-coil in CEP55”. X-ray diffraction. MolNFT v1 #61974 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3E1R
- Type
- protein
- Length
- 101 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Centrosomal protein of 55 kda; Programmed cell death 6-interacting protein
- UniProt
- Q53EZ4, Q8WUM4
Structure
x-ray diffraction · 3 distinct chains · 82% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Centrosomal protein of 55 kda | protein | 46 | 96% helix, 0% strand | Q53EZ4 |
| B | Centrosomal protein of 55 kda | protein | 42 | 93% helix, 0% strand | Q53EZ4 |
| C | Programmed cell death 6-interacting protein | protein | 13 | 0% helix, 0% strand | Q8WUM4 |
Interfaces
3 interfaces between chains.
- A–B · 1169 Ų buried · 5 hydrogen bonds · protein-protein
- A–C · 549 Ų buried · 2 hydrogen bonds · protein-protein
- B–C · 243 Ų buried · 5 hydrogen bonds · protein-protein
Compared structures
- 3E1R · Midbody targeting of the ESCRT machinery by a non-canonical coiled-coil in CEP55 · the same entry in another collection · chain A against A, TM-score 1.00
- Q53EZ4 · AlphaFold monomer V2.0 prediction for centrosomal protein of 55 kda (Q53EZ4) · a predicted model of the same protein · chain A against A, TM-score 0.91
- Q8WUM4 · AlphaFold monomer V2.0 prediction for programmed cell death 6-interacting protein (Q8WUM4) · a predicted model of the same protein · chain C against A, TM-score 0.25
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q53EZ4
- Every structure of UniProt Q8WUM4
- Elsewhere: RCSB PDB 3E1R · PDBe 3E1R · UniProt Q53EZ4 · UniProt Q8WUM4
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