MolNFT v1 · #61612 · protein
Crystal structure of the oxidoreductase ylbe from lactococcus lactis, northeast structural genomics consortium target KR121.
3DQP: “Crystal structure of the oxidoreductase ylbe from lactococcus lactis, northeast structural genomics…”. X-ray diffraction, 1 pocket (best druggability 0.56). MolNFT v1 #61612 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 3DQP
- Type
- protein
- Length
- 219 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Oxidoreductase ylbe
- UniProt
- Q9CGI7
- Pockets
- 1 · best druggability 0.56
Structure
x-ray diffraction · 1 distinct chain · 37% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Oxidoreductase ylbe | protein | 219 | 37% helix, 22% strand | Q9CGI7 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 281 | 0.56 | 0.77 | 43 | empty |
Modifications
Observed in the structure: 6 modified (engineered).
Compared structures
- 3DQP · Crystal structure of the oxidoreductase ylbE from Lactococcus lactis, Northeast… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9CGI7
- Elsewhere: RCSB PDB 3DQP · PDBe 3DQP · UniProt Q9CGI7
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