MolNFT v1 · #60335 · protein
Crystal structure of MST1 kinase
3COM · SERINE/THREONINE-protein kinase 4: “Crystal structure of MST1 kinase”. X-ray diffraction, 4 pockets (best druggability 0.62). MolNFT v1 #60335 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3COM
- Type
- protein
- Length
- 547 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- SERINE/THREONINE-protein kinase 4
- EC
- 2.7.11.1
- UniProt
- Q13043
- Pockets
- 4 · best druggability 0.62
Structure
x-ray diffraction · 2 distinct chains · 40% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | SERINE/THREONINE-protein kinase 4 (EC 2.7.11.1) | protein | 266 | 40% helix, 20% strand | Q13043 |
| B | SERINE/THREONINE-protein kinase 4 (EC 2.7.11.1) | protein | 281 | 40% helix, 18% strand | Q13043 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 448 | 0.62 | 0.76 | 59 | empty |
| 2 | 362 | 0.58 | 0.75 | 41 | empty |
| 3 | 136 | 0.46 | 0.76 | 14 | empty |
| 4 | 92 | 0.37 | 0.76 | 16 | empty |
Interfaces
1 interface between chains.
- A–B · 862 Ų buried · 9 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 4 modified (phosphorylation).
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q13043
- Elsewhere: RCSB PDB 3COM · PDBe 3COM · UniProt Q13043
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