MolNFT v1 · #60193 · protein

Crystal structure of a mycobacterial protein

3CKJ · Putative uncharacterized protein: “Crystal structure of a mycobacterial protein”. X-ray diffraction, 1 ligand (PO4), 1 pocket (best druggability 0.73). MolNFT v1 #60193 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3CKJ
Type: protein
Length: 300 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative uncharacterized protein
UniProt: Q73WU1
Ligands: PO4
Pockets: 1 · best druggability 0.73

Structure

x-ray diffraction · 1 distinct chain · 37% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative uncharacterized protein	protein	300	37% helix, 21% strand	Q73WU1

Ligands and binding sites

PO4 · Phosphate ion · ion · chains A
MRD · (4R)-2-methylpentane-2,4-diol · additive · 3 copies · chains A
CIT · Citric acid · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	564	0.73	0.81	56	CIT, MRD

Compared structures

3CKJ · Crystal Structure of a Mycobacterial Protein · the same entry in another collection · chain A against A, TM-score 1.00
Q73WU1 · AlphaFold monomer V2.0 prediction for glucosyl-3-phosphoglycerate synthase (Q73WU1) · a predicted model of the same protein · chain A against A, TM-score 0.94

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q73WU1
Elsewhere: RCSB PDB 3CKJ · PDBe 3CKJ · UniProt Q73WU1

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