MolNFT v1 · #59558 · protein
Substrate binding, deprotonation and selectivity at the periplasmic entrance of the E. COLI ammonia channel amtb
3C1I: “Substrate binding, deprotonation and selectivity at the periplasmic entrance of the E. COLI ammonia channel…”. X-ray diffraction, 2 pockets (best druggability 0.68). MolNFT v1 #59558 on GenesisL1: 3D structure, binding sites and…
- PDB
- 3C1I
- Type
- protein
- Length
- 366 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ammonia channel
- UniProt
- P69681
- Pockets
- 2 · best druggability 0.68
Structure
x-ray diffraction · 1 distinct chain · 74% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ammonia channel | protein | 366 | 74% helix, 2% strand | P69681 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 173 | 0.68 | 0.86 | 38 | LDA |
| 2 | 170 | 0.46 | 0.75 | 25 | ACT |
Compared structures
- 3C1I · Substrate binding, deprotonation and selectivity at the periplasmic entrance of the E.… · the same entry in another collection · chain A against A, TM-score 1.00
- P69681 · AlphaFold monomer V2.0 prediction for ammonia channel (P69681) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P69681
- Elsewhere: RCSB PDB 3C1I · PDBe 3C1I · UniProt P69681
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