MolNFT v1 · #57830 · protein
Crystal structure of ancestral congerin con-anc'-N28K
3AK0: “Crystal structure of ancestral congerin con-anc'-N28K”. X-ray diffraction, 2 ligands (BGC, GAL), 1 pocket (best druggability 0.28). MolNFT v1 #57830 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3AK0
- Type
- protein
- Length
- 264 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ancestral congerin con-anc
- Ligands
- BGC, GAL
- Pockets
- 1 · best druggability 0.28
Structure
x-ray diffraction · 1 distinct chain · 0% helix, 66% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Ancestral congerin con-anc | protein | 132 | 0% helix, 66% strand | — |
Ligands and binding sites
- BGC · beta-D-glucopyranose · sugar · 2 copies · chains A, B
- GAL · beta-D-galactopyranose · sugar · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 55 | 0.28 | 0.74 | 15 | empty |
Interfaces
1 interface between chains.
- A–B · 609 Ų buried · 10 hydrogen bonds · protein-protein
Compared structures
- 3AK0 · Crystal Structure of Ancestral Congerin Con-anc'-N28K · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 3AK0 · PDBe 3AK0
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