MolNFT v1 · #57081 · protein
Crystal structure of the complex between GP41 fragment N36 and fusion inhibitor C34/S138A
2ZZO · Transmembrane protein: “Crystal structure of the complex between GP41 fragment N36 and fusion inhibitor C34/S138A”. X-ray diffraction, 1 ligand (ACE). MolNFT v1 #57081 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2ZZO
- Type
- protein
- Length
- 70 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Transmembrane protein
- UniProt
- P04580, P04578
- Ligands
- ACE
Structure
x-ray diffraction · 2 distinct chains · 93% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| N | Transmembrane protein | protein | 36 | 94% helix, 0% strand | P04580 |
| C | Transmembrane protein | protein | 34 | 91% helix, 0% strand | P04578 |
Ligands and binding sites
- ACE · Acetyl group · ligand · 2 copies · chains N, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- N–C · 763 Ų buried · 7 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 covalent (covalent ligand).
Compared structures
- 2ZZO · Crystal structure of the complex between GP41 fragment N36 and fusion inhibitor C34/S138A · the same entry in another collection · chain N against N, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P04580
- Every structure of UniProt P04578
- Elsewhere: RCSB PDB 2ZZO · PDBe 2ZZO · UniProt P04580 · UniProt P04578
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