MolNFT v1 · #56817 · protein
Msreca Q196A atpgs form IV
2ZRJ · Protein reca: “Msreca Q196A atpgs form IV”. X-ray diffraction, 2 ligands (AGS, CL), 3 pockets (best druggability 0.44). MolNFT v1 #56817 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2ZRJ
- Type
- protein
- Length
- 314 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein reca
- EC
- 3.4.99.37
- UniProt
- Q59560
- Ligands
- AGS, CL
- Pockets
- 3 · best druggability 0.44
Structure
x-ray diffraction · 1 distinct chain · 40% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein reca (EC 3.4.99.37) | protein | 314 | 40% helix, 23% strand | Q59560 |
Ligands and binding sites
- AGS · Phosphothiophosphoric acid-adenylate ester · ligand · chains A
- CL · Chloride ion · ion · chains A
- GOL · Glycerol · additive · 2 copies · chains A
- PE4 · 2-{2-[2-(2-{2-[2-(2-ethoxy-ethoxy)-ethoxy]-ethoxy}-ethoxy)-ethoxy]-ethoxy}-ethanol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 163 | 0.44 | 0.75 | 26 | AGS, GOL |
| 2 | 174 | 0.43 | 0.74 | 33 | CL |
| 3 | 106 | 0.38 | 0.75 | 23 | empty |
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q59560
- Elsewhere: RCSB PDB 2ZRJ · PDBe 2ZRJ · UniProt Q59560
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