MolNFT v1 · #55990 · protein

Crystal structure of hype from thermococcus kodakaraensis (inward form)

2Z1F · Hydrogenase EXPRESSION/FORMATION protein hype: “Crystal structure of hype from thermococcus kodakaraensis (inward form)”. X-ray diffraction, 3 pockets (best druggability 0.57). MolNFT v1 #55990 on GenesisL1: 3D structure, binding…

PDB: 2Z1F
Type: protein
Length: 304 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hydrogenase EXPRESSION/FORMATION protein hype
UniProt: Q5JII7
Pockets: 3 · best druggability 0.57

Structure

x-ray diffraction · 1 distinct chain · 32% helix, 27% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Hydrogenase EXPRESSION/FORMATION protein hype	protein	304	32% helix, 27% strand	Q5JII7

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	182	0.57	0.81	27	empty
2	72	0.33	0.75	20	empty
3	56	0.31	0.76	18	empty

Compared structures

2Z1F · Crystal structure of HypE from Thermococcus kodakaraensis (inward form) · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q5JII7
Elsewhere: RCSB PDB 2Z1F · PDBe 2Z1F · UniProt Q5JII7

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