Research workbench
Crystal structure of hype from thermococcus kodakaraensis (inward form)
Analyse Crystal structure of hype from thermococcus kodakaraensis (inward form) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2Z1F
- Type
- protein
- Length
- 304 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hydrogenase EXPRESSION/FORMATION protein hype
- UniProt
- Q5JII7
- Pockets
- 3 · best druggability 0.57
Structure
x-ray diffraction · 1 distinct chain · 32% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hydrogenase EXPRESSION/FORMATION protein hype | protein | 304 | 32% helix, 27% strand | Q5JII7 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 182 | 0.57 | 0.81 | 27 | empty |
| 2 | 72 | 0.33 | 0.75 | 20 | empty |
| 3 | 56 | 0.31 | 0.76 | 18 | empty |
Compared structures
- 2Z1F · Crystal structure of HypE from Thermococcus kodakaraensis (inward form) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5JII7
- Elsewhere: RCSB PDB 2Z1F · PDBe 2Z1F · UniProt Q5JII7
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