MolNFT v1 · #55592 · protein + DNA
Structure of the SCL:E47:LMO2:LDB1 complex bound to DNA
2YPA: “Structure of the SCL:E47:LMO2:LDB1 complex bound to DNA”. X-ray diffraction. MolNFT v1 #55592 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2YPA
- Type
- protein + DNA
- Length
- 318 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P17542, P15923, P25791, Q86U70
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 67 | — | P17542 |
| B | — | protein | 73 | — | P15923 |
| C | — | protein | 126 | — | P25791 |
| D | — | protein | 30 | — | Q86U70 |
| E | — | dna | 11 | — | — |
| F | — | dna | 11 | — | — |
Compared structures
- 2YPA · Structure of the SCL:E47:LMO2:LDB1 complex bound to DNA · the same entry in another collection · chain F against F, TM-score 1.00
- P15923 · AlphaFold monomer V2.0 prediction for transcription factor E2-alpha (P15923) · a predicted model of the same protein · chain B against A, TM-score 0.96
- P17542 · AlphaFold monomer V2.0 prediction for T-cell acute lymphocytic leukemia protein 1 (P17542) · a predicted model of the same protein · chain A against A, TM-score 0.95
- P25791 · AlphaFold monomer V2.0 prediction for rhombotin-2 (P25791) · a predicted model of the same protein · chain C against A, TM-score 0.81
- Q86U70 · AlphaFold monomer V2.0 prediction for lim domain-binding protein 1 (Q86U70) · a predicted model of the same protein · chain D against A, TM-score 0.28
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P17542
- Every structure of UniProt P15923
- Every structure of UniProt P25791
- Every structure of UniProt Q86U70
- Elsewhere: RCSB PDB 2YPA · PDBe 2YPA · UniProt P17542 · UniProt P15923 · UniProt P25791 · UniProt Q86U70
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