MolNFT v1 · #55506 · protein
Solution structure of the QUA1 dimerization domain of pxqua, the xenopus ortholog of quaking.
2YMJ · Protein quaking-a: “Solution structure of the QUA1 dimerization domain of pxqua, the xenopus ortholog of quaking.”. Solution nmr, 1 pocket (best druggability 0.39). MolNFT v1 #55506 on GenesisL1: 3D structure, binding sites and…
- PDB
- 2YMJ
- Type
- protein
- Length
- 104 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein quaking-a
- UniProt
- Q32NN2
- Pockets
- 1 · best druggability 0.39
Structure
solution nmr · 1 distinct chain · 63% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Protein quaking-a | protein | 52 | 63% helix, 0% strand | Q32NN2 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 74 | 0.39 | 0.78 | 11 | empty |
Interfaces
1 interface between chains.
- A–B · 1332 Ų buried · 22 hydrogen bonds · protein-protein
Compared structures
- 2YMJ · Solution structure of the QUA1 dimerization domain of pXqua, the Xenopus ortholog of… · the same entry in another collection · chain B against B, TM-score 1.00
- Q32NN2 · AlphaFold monomer V2.0 prediction for protein quaking-a (Q32NN2) · a predicted model of the same protein · chain A against A, TM-score 0.74
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q32NN2
- Elsewhere: RCSB PDB 2YMJ · PDBe 2YMJ · UniProt Q32NN2
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