MolNFT v1 · #5542 · protein

Structure of bacteriophage T4 gene product 11, the interface between the baseplate and short tail fibers

1EL6 · Baseplate structural protein GP11: “Structure of bacteriophage T4 gene product 11, the interface between the baseplate and short tail fibers”. X-ray diffraction, 4 pockets (best druggability 0.84). MolNFT v1 #5542 on GenesisL1: 3D…

PDB: 1EL6
Type: protein
Length: 624 residues
Chains: 3
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Baseplate structural protein GP11
UniProt: P10929
Pockets: 4 · best druggability 0.84

Structure

x-ray diffraction · 1 distinct chain · 17% helix, 36% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B, C	Baseplate structural protein GP11	protein	208	17% helix, 36% strand	P10929

Pockets

4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	286	0.84	0.94	38	empty
2	92	0.34	0.74	20	empty
3	93	0.33	0.73	17	empty
4	74	0.33	0.75	20	empty

Interfaces

3 interfaces between chains.

B–C · 2367 Å² buried · 37 hydrogen bonds · protein-protein
A–C · 2362 Å² buried · 34 hydrogen bonds · protein-protein
A–B · 2327 Å² buried · 31 hydrogen bonds · protein-protein

Compared structures

1EL6 · Structure of bacteriophage T4 gene product 11, the interface between the baseplate and… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P10929
Elsewhere: RCSB PDB 1EL6 · PDBe 1EL6 · UniProt P10929

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