MolNFT v1 · #54904 · protein
Structure of segment mvggvvia from the amyloid-beta peptide (ab, residues 35-42), alternate polymorph 1
2Y3K · Amyloid beta A4 protein: “Structure of segment mvggvvia from the amyloid-beta peptide (ab, residues 35-42), alternate polymorph 1”. X-ray diffraction. MolNFT v1 #54904 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2Y3K
- Type
- protein
- Length
- 64 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Amyloid beta A4 protein
- UniProt
- P05067
Structure
x-ray diffraction · 1 distinct chain · 0% helix, 75% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D, E, F, G, H | Amyloid beta A4 protein | protein | 8 | 0% helix, 75% strand | P05067 |
Interfaces
17 interfaces between chains.
- A–B · 317 Ų buried · 10 hydrogen bonds · protein-protein
- E–F · 299 Ų buried · 9 hydrogen bonds · protein-protein
- G–H · 299 Ų buried · 7 hydrogen bonds · protein-protein
- C–D · 297 Ų buried · 10 hydrogen bonds · protein-protein
- B–D · 178 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
- 2Y3K · Structure of segment MVGGVVIA from the amyloid-beta peptide (Ab, residues 35-42)… · the same entry in another collection · chain H against H, TM-score 1.00
- P05067 · AlphaFold monomer V2.0 prediction for amyloid-beta precursor protein (P05067) · a predicted model of the same protein · chain A against A, TM-score 0.67
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P05067
- Elsewhere: RCSB PDB 2Y3K · PDBe 2Y3K · UniProt P05067
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