MolNFT v1 · #54144 · protein
Structure of the amino-terminal domain from the cell-cycle regulator SWI6
2XFV · Regulatory protein SWI6: “Structure of the amino-terminal domain from the cell-cycle regulator SWI6”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #54144 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2XFV
- Type
- protein
- Length
- 216 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Regulatory protein SWI6
- UniProt
- P09959
- Ligands
- CA
Structure
x-ray diffraction · 1 distinct chain · 37% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Regulatory protein SWI6 | protein | 108 | 37% helix, 24% strand | P09959 |
Ligands and binding sites
- CA · Calcium ion · metal · 3 copies · chains A, B
- GOL · Glycerol · additive · 3 copies · chains A, B
- ACT · Acetate ion · additive · chains A
- CAC · Cacodylate ion · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 1168 Ų buried · 17 hydrogen bonds · protein-protein
Compared structures
- 2XFV · Structure of the amino-terminal domain from the cell-cycle regulator Swi6 · the same entry in another collection · chain B against B, TM-score 1.00
- P09959 · AlphaFold monomer V2.0 prediction for regulatory protein SWI6 (P09959) · a predicted model of the same protein · chain A against A, TM-score 0.90
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P09959
- Elsewhere: RCSB PDB 2XFV · PDBe 2XFV · UniProt P09959
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