MolNFT v1 · #53931 · protein

Structure of a E.COLI porin

2X9K · Outer membrane protein G: “Structure of a E.COLI porin”. X-ray diffraction, 2 pockets (best druggability 0.74). MolNFT v1 #53931 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2X9K
Type: protein
Length: 278 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Outer membrane protein G
UniProt: P76045
Pockets: 2 · best druggability 0.74

Structure

x-ray diffraction · 1 distinct chain · 1% helix, 68% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Outer membrane protein G	protein	278	1% helix, 68% strand	P76045

Ligands and binding sites

BOG · octyl beta-D-glucopyranoside · additive · 9 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1065	0.74	0.77	89	empty
2	55	0.25	0.72	14	BOG

Compared structures

2X9K · Structure of a E.coli porin · the same entry in another collection · chain A against A, TM-score 1.00
P76045 · AlphaFold monomer V2.0 prediction for outer membrane porin G (P76045) · a predicted model of the same protein · chain A against A, TM-score 0.93

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P76045
Elsewhere: RCSB PDB 2X9K · PDBe 2X9K · UniProt P76045

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.