Research workbench
Structure of a E.COLI porin
Analyse Structure of a E.COLI porin in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2X9K
- Type
- protein
- Length
- 278 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Outer membrane protein G
- UniProt
- P76045
- Pockets
- 2 · best druggability 0.74
Structure
x-ray diffraction · 1 distinct chain · 1% helix, 68% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Outer membrane protein G | protein | 278 | 1% helix, 68% strand | P76045 |
Ligands and binding sites
- BOG · octyl beta-D-glucopyranoside · additive · 9 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1065 | 0.74 | 0.77 | 89 | empty |
| 2 | 55 | 0.25 | 0.72 | 14 | BOG |
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P76045
- Elsewhere: RCSB PDB 2X9K · PDBe 2X9K · UniProt P76045
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