MolNFT v1 · #53804 · protein
The crystal structure of PHAZ7 at atomic (1.2 ångström) resolution reveals details of the active site and suggests a substrate binding mode
2X5X · Phb depolymerase PHAZ7: “The crystal structure of PHAZ7 at atomic (1.2 ångström) resolution reveals details of the active site and…”. X-ray diffraction, 4 ligands (SO2, NA, IOD). MolNFT v1 #53804 on GenesisL1: 3D structure, binding…
- PDB
- 2X5X
- Type
- protein
- Length
- 342 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Phb depolymerase PHAZ7
- UniProt
- Q939Q9
- Ligands
- SO2, NA, IOD, CL
Structure
x-ray diffraction · 1 distinct chain · 28% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phb depolymerase PHAZ7 | protein | 342 | 28% helix, 16% strand | Q939Q9 |
Ligands and binding sites
- SO2 · Sulfur dioxide · ligand · chains A
- NA · Sodium ion · metal · 2 copies · chains A
- IOD · Iodide ion · ion · 8 copies · chains A
- CL · Chloride ion · ion · 6 copies · chains A
- PG4 · Tetraethylene glycol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 5 disulfide, 2 covalent (disulfide, covalent ligand).
Compared structures
- 2X5X · The crystal structure of PhaZ7 at atomic (1.2 Angstrom) resolution reveals details of the… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q939Q9
- Elsewhere: RCSB PDB 2X5X · PDBe 2X5X · UniProt Q939Q9
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