MolNFT v1 · #53689 · protein

Crystal structure of the outer membrane protein oprg from pseudomonas aeruginosa

2X27: “Crystal structure of the outer membrane protein oprg from pseudomonas aeruginosa”. X-ray diffraction, 1 ligand (NI), 1 pocket (best druggability 0.41). MolNFT v1 #53689 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2X27
Type: protein
Length: 209 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Outer membrane protein oprg
UniProt: Q9HWW1
Ligands: NI
Pockets: 1 · best druggability 0.41

Structure

x-ray diffraction · 1 distinct chain · 2% helix, 66% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
X	Outer membrane protein oprg	protein	209	2% helix, 66% strand	Q9HWW1

Ligands and binding sites

NI · Nickel (II) ion · metal · 3 copies · chains X
C8E · (hydroxyethyloxy)tri(ethyloxy)octane · additive · 12 copies · chains X

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	60	0.41	0.81	18	empty

Compared structures

2X27 · Crystal structure of the outer membrane protein OprG from Pseudomonas aeruginosa · the same entry in another collection · chain X against X, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9HWW1
Elsewhere: RCSB PDB 2X27 · PDBe 2X27 · UniProt Q9HWW1

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