MolNFT v1 · #53171 · protein
Crystal structure of the hinge domain of mukb
2WMM · Chromosome partition protein mukb: “Crystal structure of the hinge domain of mukb”. X-ray diffraction, 1 ligand (MLT), 6 pockets (best druggability 0.67). MolNFT v1 #53171 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 2WMM
- Type
- protein
- Length
- 324 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Chromosome partition protein mukb
- UniProt
- P22523
- Ligands
- MLT
- Pockets
- 6 · best druggability 0.67
Structure
x-ray diffraction · 1 distinct chain · 48% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Chromosome partition protein mukb | protein | 162 | 48% helix, 17% strand | P22523 |
Ligands and binding sites
- MLT · D-malate · ligand · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 319 | 0.67 | 0.81 | 48 | MLT |
| 2 | 317 | 0.57 | 0.76 | 35 | empty |
| 3 | 59 | 0.34 | 0.77 | 16 | empty |
| 4 | 58 | 0.33 | 0.77 | 16 | empty |
| 5 | 69 | 0.28 | 0.73 | 18 | empty |
Interfaces
1 interface between chains.
- A–B · 1594 Ų buried · 35 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P22523
- Elsewhere: RCSB PDB 2WMM · PDBe 2WMM · UniProt P22523
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