MolNFT v1 · #5267 · protein
Structure of erythrocruorin in different ligand states refined at 1.4 ångströms resolution
1ECN · Erythrocruorin (cyano met): “Structure of erythrocruorin in different ligand states refined at 1.4 ångströms resolution”. X-ray diffraction, 2 ligands (HEM, CYN), 1 pocket (best druggability 0.72). MolNFT v1 #5267 on GenesisL1: 3D…
- PDB
- 1ECN
- Type
- protein
- Length
- 136 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Erythrocruorin (cyano met)
- UniProt
- P02229
- Ligands
- HEM, CYN
- Pockets
- 1 · best druggability 0.72
Structure
x-ray diffraction · 1 distinct chain · 75% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Erythrocruorin (cyano met) | protein | 136 | 75% helix, 0% strand | P02229 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 235 | 0.72 | 0.86 | 23 | CYN, HEM |
Compared structures
- 1ECN · Structure of erythrocruorin in different ligand states refined at 1.4 ångströms resolution · the same entry in another collection · chain A against A, TM-score 1.00
- P02229 · AlphaFold monomer V2.0 prediction for globin ctt-III (P02229) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P02229
- Elsewhere: RCSB PDB 1ECN · PDBe 1ECN · UniProt P02229
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