Research workbench
Structure of erythrocruorin in different ligand states refined at 1.4 ångströms resolution
Analyse Structure of erythrocruorin in different ligand states refined at 1.4 ångströms… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1ECN
- Type
- protein
- Length
- 136 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Erythrocruorin (cyano met)
- UniProt
- P02229
- Ligands
- HEM, CYN
- Pockets
- 1 · best druggability 0.72
Structure
x-ray diffraction · 1 distinct chain · 75% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Erythrocruorin (cyano met) | protein | 136 | 75% helix, 0% strand | P02229 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 235 | 0.72 | 0.86 | 23 | CYN, HEM |
Compared structures
- 1ECN · Structure of erythrocruorin in different ligand states refined at 1.4 ångströms resolution · the same entry in another collection · chain A against A, TM-score 1.00
- P02229 · AlphaFold monomer V2.0 prediction for globin ctt-III (P02229) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P02229
- Elsewhere: RCSB PDB 1ECN · PDBe 1ECN · UniProt P02229
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