MolNFT v1 · #52479 · protein

Crystal structure of the aminoacid kinase domain of the glutamate 5 kinase of escherichia COLI.

2W21 · Glutamate 5-kinase: “Crystal structure of the aminoacid kinase domain of the glutamate 5 kinase of escherichia COLI.”. X-ray diffraction, 1 ligand (SO4), 1 pocket (best druggability 0.48). MolNFT v1 #52479 on GenesisL1: 3D…

PDB: 2W21
Type: protein
Length: 246 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Glutamate 5-kinase
EC: 2.7.2.11
UniProt: P0A7B5
Ligands: SO4
Pockets: 1 · best druggability 0.48

Structure

x-ray diffraction · 1 distinct chain · 46% helix, 18% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Glutamate 5-kinase (EC 2.7.2.11)	protein	246	46% helix, 18% strand	P0A7B5

Ligands and binding sites

SO4 · Sulfate ion · ion · 4 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	178	0.48	0.77	28	SO4

Compared structures

2W21 · Crystal structure of the aminoacid kinase domain of the glutamate 5 kinase of Escherichia… · the same entry in another collection · chain A against A, TM-score 1.00
P0A7B5 · AlphaFold monomer V2.0 prediction for glutamate 5-kinase (P0A7B5) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0A7B5
Elsewhere: RCSB PDB 2W21 · PDBe 2W21 · UniProt P0A7B5

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