MolNFT v1 · #5118 · protein

The three-dimensional structure of human S100A12

1E8A: “The three-dimensional structure of human S100A12”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #5118 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1E8A
Type: protein
Length: 175 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: S100A12
UniProt: P80511
Ligands: CA

Structure

x-ray diffraction · 2 distinct chains · 63% helix, 5% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	S100A12	protein	87	64% helix, 5% strand	P80511
B	S100A12	protein	88	63% helix, 5% strand	P80511

Ligands and binding sites

CA · Calcium ion · metal · 4 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

A–B · 1400 Å² buried · 20 hydrogen bonds · protein-protein

Compared structures

1E8A · The three-dimensional structure of human S100A12 · the same entry in another collection · chain A against A, TM-score 1.00
P80511 · AlphaFold monomer V2.0 prediction for protein S100-A12 (P80511) · a predicted model of the same protein · chain B against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P80511
Elsewhere: RCSB PDB 1E8A · PDBe 1E8A · UniProt P80511

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