MolNFT v1 · #50689 · protein

Structure of GSPT1/ERF3A-pabc

2RQH · G1 to S phase transition 1: “Structure of GSPT1/ERF3A-pabc”. Solution nmr, 1 pocket (best druggability 0.40). MolNFT v1 #50689 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2RQH
Type: protein
Length: 105 residues
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: G1 to S phase transition 1; Polyadenylate-binding protein 1
UniProt: Q8K2E1, P11940
Pockets: 1 · best druggability 0.40

Structure

solution nmr · 2 distinct chains · 59% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	G1 to S phase transition 1	protein	22	0% helix, 0% strand	Q8K2E1
B	Polyadenylate-binding protein 1	protein	83	75% helix, 0% strand	P11940

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	92	0.40	0.77	18	empty

Interfaces

1 interface between chains.

A–B · 677 Å² buried · 4 hydrogen bonds · protein-protein

Compared structures

2RQH · Structure of GSPT1/ERF3A-PABC · the same entry in another collection · chain A against A, TM-score 1.00
P11940 · AlphaFold monomer V2.0 prediction for polyadenylate-binding protein 1 (P11940) · a predicted model of the same protein · chain B against A, TM-score 0.81

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8K2E1
Every structure of UniProt P11940
Elsewhere: RCSB PDB 2RQH · PDBe 2RQH · UniProt Q8K2E1 · UniProt P11940

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