MolNFT v1 · #50610 · protein
Solution structure of the N-terminal sap domain of sumo E3 ligases from saccharomyces cerevisiae
2RNN · E3 sumo-protein ligase SIZ1: “Solution structure of the N-terminal sap domain of sumo E3 ligases from saccharomyces cerevisiae”. Solution nmr, 1 pocket (best druggability 0.37). MolNFT v1 #50610 on GenesisL1: 3D structure, binding…
- PDB
- 2RNN
- Type
- protein
- Length
- 114 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- E3 sumo-protein ligase SIZ1
- EC
- 6.-.-.-
- UniProt
- Q04195
- Pockets
- 1 · best druggability 0.37
Structure
solution nmr · 1 distinct chain · 59% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | E3 sumo-protein ligase SIZ1 (EC 6.-.-.-) | protein | 114 | 59% helix, 0% strand | Q04195 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 95 | 0.37 | 0.75 | 24 | empty |
Compared structures
- 2RNN · Solution Structure of the N-terminal SAP Domain of SUMO E3 Ligases from Saccharomyces… · the same entry in another collection · chain A against A, TM-score 1.00
- Q04195 · AlphaFold monomer V2.0 prediction for E3 sumo-protein ligase SIZ1 (Q04195) · a predicted model of the same protein · chain A against A, TM-score 0.72
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q04195
- Elsewhere: RCSB PDB 2RNN · PDBe 2RNN · UniProt Q04195
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