MolNFT v1 · #50069 · protein
Crystal structure of ribonuclease II family protein from deinococcus radiodurans, hexagonal crystal form. northeast structural genomics target DRR63
2R7F: “Crystal structure of ribonuclease II family protein from deinococcus radiodurans, hexagonal crystal form.…”. X-ray diffraction, 3 pockets (best druggability 0.73). MolNFT v1 #50069 on GenesisL1: 3D structure, binding sites and…
- PDB
- 2R7F
- Type
- protein
- Length
- 459 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ribonuclease II family protein
- UniProt
- Q9RYD0
- Pockets
- 3 · best druggability 0.73
Structure
x-ray diffraction · 1 distinct chain · 34% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribonuclease II family protein | protein | 459 | 34% helix, 25% strand | Q9RYD0 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 821 | 0.73 | 0.78 | 74 | empty |
| 2 | 137 | 0.46 | 0.77 | 17 | empty |
| 3 | 84 | 0.44 | 0.80 | 16 | empty |
Modifications
Observed in the structure: 9 modified (engineered).
Compared structures
- 2R7F · Crystal structure of ribonuclease II family protein from Deinococcus radiodurans… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9RYD0
- Elsewhere: RCSB PDB 2R7F · PDBe 2R7F · UniProt Q9RYD0
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