MolNFT v1 · #49332 · protein
Crystal structure of the C645S mutant of the 5TH PDZ domain of inad
2QKV · Inactivation-no-after-potential D protein: “Crystal structure of the C645S mutant of the 5TH PDZ domain of inad”. X-ray diffraction, 2 pockets (best druggability 0.36). MolNFT v1 #49332 on GenesisL1: 3D structure, binding sites and…
- PDB
- 2QKV
- Type
- protein
- Length
- 184 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Inactivation-no-after-potential D protein
- UniProt
- Q24008
- Pockets
- 2 · best druggability 0.36
Structure
x-ray diffraction · 1 distinct chain · 16% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Inactivation-no-after-potential D protein | protein | 92 | 16% helix, 36% strand | Q24008 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 75 | 0.36 | 0.76 | 11 | empty |
| 2 | 60 | 0.31 | 0.74 | 10 | empty |
Compared structures
- 2QKV · Crystal Structure of the C645S Mutant of the 5th PDZ Domain of InaD · the same entry in another collection · chain A against A, TM-score 1.00
- Q24008 · AlphaFold monomer V2.0 prediction for inactivation-no-after-potential D protein (Q24008) · a predicted model of the same protein · chain A against A, TM-score 0.89
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q24008
- Elsewhere: RCSB PDB 2QKV · PDBe 2QKV · UniProt Q24008
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