Research workbench
Crystal structure of the C645S mutant of the 5TH PDZ domain of inad
Analyse Crystal structure of the C645S mutant of the 5TH PDZ domain of inad in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2QKV
- Type
- protein
- Length
- 184 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Inactivation-no-after-potential D protein
- UniProt
- Q24008
- Pockets
- 2 · best druggability 0.36
Structure
x-ray diffraction · 1 distinct chain · 16% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Inactivation-no-after-potential D protein | protein | 92 | 16% helix, 36% strand | Q24008 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 75 | 0.36 | 0.76 | 11 | empty |
| 2 | 60 | 0.31 | 0.74 | 10 | empty |
Compared structures
- 2QKV · Crystal Structure of the C645S Mutant of the 5th PDZ Domain of InaD · the same entry in another collection · chain A against A, TM-score 1.00
- Q24008 · AlphaFold monomer V2.0 prediction for inactivation-no-after-potential D protein (Q24008) · a predicted model of the same protein · chain A against A, TM-score 0.89
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q24008
- Elsewhere: RCSB PDB 2QKV · PDBe 2QKV · UniProt Q24008
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