MolNFT v1 · #48906 · protein
The wild type androgen receptor ligand binding domain bound with testosterone and an ar 20-30 peptide
2Q7I: “The wild type androgen receptor ligand binding domain bound with testosterone and an ar 20-30 peptide”. X-ray diffraction, 2 ligands (TES, SO4), 2 pockets (best druggability 0.83). MolNFT v1 #48906 on GenesisL1: 3D structure…
- PDB
- 2Q7I
- Type
- protein
- Length
- 251 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Androgen receptor
- UniProt
- P10275
- Ligands
- TES, SO4
- Pockets
- 2 · best druggability 0.83
Structure
x-ray diffraction · 2 distinct chains · 69% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Androgen receptor | protein | 241 | 68% helix, 5% strand | P10275 |
| B | Androgen receptor | protein | 10 | 80% helix, 0% strand | P10275 |
Ligands and binding sites
- TES · Testosterone · ligand · chains A
- SO4 · Sulfate ion · ion · 2 copies · chains A
- GOL · Glycerol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 162 | 0.83 | 0.98 | 21 | TES |
| 2 | 129 | 0.64 | 0.87 | 22 | GOL |
Interfaces
1 interface between chains.
- A–B · 516 Ų buried · 5 hydrogen bonds · protein-protein
Compared structures
- 2Q7I · The Wild Type Androgen Receptor Ligand Binding Domain Bound with Testosterone and an AR… · the same entry in another collection · chain A against A, TM-score 1.00
- P10275 · AlphaFold monomer V2.0 prediction for androgen receptor (P10275) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P10275
- Elsewhere: RCSB PDB 2Q7I · PDBe 2Q7I · UniProt P10275
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.