MolNFT v1 · #48775 · protein
Ensemble refinement of the protein crystal structure of an arabidopsis thaliana putative steroid sulphotransferase
2Q3M · Flavonol sulfotransferase-like: “Ensemble refinement of the protein crystal structure of an arabidopsis thaliana putative steroid…”. X-ray diffraction, 4 pockets (best druggability 0.54). MolNFT v1 #48775 on GenesisL1: 3D structure…
- PDB
- 2Q3M
- Type
- protein
- Length
- 284 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Flavonol sulfotransferase-like
- EC
- 2.8.2.-
- UniProt
- P52839
- Pockets
- 4 · best druggability 0.54
Structure
x-ray diffraction · 1 distinct chain · 46% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Flavonol sulfotransferase-like (EC 2.8.2.-) | protein | 284 | 46% helix, 8% strand | P52839 |
Ligands and binding sites
- MLA · Malonic acid · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 147 | 0.54 | 0.80 | 29 | MLA |
| 2 | 59 | 0.51 | 0.86 | 17 | empty |
| 3 | 102 | 0.42 | 0.77 | 24 | empty |
| 4 | 50 | 0.37 | 0.80 | 15 | empty |
Compared structures
- 2Q3M · Ensemble refinement of the protein crystal structure of an Arabidopsis thaliana putative… · the same entry in another collection · chain A against A, TM-score 1.00
- P52839 · AlphaFold monomer V2.0 prediction for cytosolic sulfotransferase 12 (P52839) · a predicted model of the same protein · chain A against A, TM-score 0.91
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P52839
- Elsewhere: RCSB PDB 2Q3M · PDBe 2Q3M · UniProt P52839
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