MolNFT v1 · #47996 · protein + DNA

Na in the active site of DNA polymerase lambda

2PFN: “Na in the active site of DNA polymerase lambda”. X-ray diffraction. MolNFT v1 #47996 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2PFN
Type: protein + DNA
Length: 346 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q9UGP5

Structure

x-ray diffraction · 4 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
T	—	dna	11	—	—
P	—	dna	6	—	—
D	—	dna	4	—	—
A	—	protein	325	—	Q9UGP5

Compared structures

2PFN · Na in the active site of DNA Polymerase lambda · the same entry in another collection · chain T against T, TM-score 1.00
Q9UGP5 · AlphaFold monomer V2.0 prediction for DNA polymerase lambda (Q9UGP5) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9UGP5
Elsewhere: RCSB PDB 2PFN · PDBe 2PFN · UniProt Q9UGP5

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.