MolNFT v1 · #47691 · protein
Crystal structure of hypothetical protein PH0156 from pyrococcus horikoshii OT3
2P62: “Crystal structure of hypothetical protein PH0156 from pyrococcus horikoshii OT3”. X-ray diffraction, 5 pockets (best druggability 0.52). MolNFT v1 #47691 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2P62
- Type
- protein
- Length
- 482 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hypothetical protein PH0156
- UniProt
- O57895
- Pockets
- 5 · best druggability 0.52
Structure
x-ray diffraction · 1 distinct chain · 44% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Hypothetical protein PH0156 | protein | 241 | 44% helix, 19% strand | O57895 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 97 | 0.52 | 0.83 | 25 | empty |
| 2 | 133 | 0.44 | 0.76 | 26 | empty |
| 3 | 93 | 0.38 | 0.75 | 18 | empty |
| 4 | 68 | 0.37 | 0.79 | 21 | empty |
| 5 | 57 | 0.33 | 0.77 | 16 | empty |
Interfaces
1 interface between chains.
- A–B · 1140 Ų buried · 19 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 2P62 · Crystal structure of hypothetical protein PH0156 from Pyrococcus horikoshii OT3 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O57895
- Elsewhere: RCSB PDB 2P62 · PDBe 2P62 · UniProt O57895
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